Welcome to IsoTools’s documentation!

Contents:

• Getting Started
  • Installation
  • Usage
  • Citation and feedback
• Tutorials
  • Setup and Data Preparation
  • Command Line Interface (CLI)
  • Transcriptome Reconstruction
  • Transcriptome Import
  • Saturation analysis
  • Quality control and sequencing artifacts
  • Data access and Filtering
  • Alternative splicing events
  • Differential Splicing
  • Protein Domains
  • Case Study: PacBio 2019 Alzheimer Sequel2 dataset
  • Case Study: ENCODE Long Read Sequel2 dataset
• Command line interface
• API Reference
  • isotools.Transcriptome
  • isotools.Gene
  • isotools.SegmentGraph
  • isotools.plots module
  • isotools.domains module
  • constants

Indices and tables

• Index

• Search Page